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1

Außergewöhnliche Cycloaddition von Tetracyanäthylen an Dispiro[2.0.2.4]deca-7,9-dien

Dr. Dieter Kaufmann, Prof. Dr. Armin de Meijere, Dr. Brian Hingerty, Priv.-Doz. Dr. Wolfram Saenger

Journal:

Angewandte Chemie

Year:

1975

File:

PDF, 220 KB

1975

2

Flip-Flop-Wasserstoffbrückenbindungen in β-Cyclodextrin — ein allgemein gültiges Prinzip in Polysacchariden?

Prof. Dr. Wolfram Saenger, Christian Betzel, Dr. Brian Hingerty, Dr. George M. Brown

Journal:

Angewandte Chemie

Year:

1983

Language:

german

File:

PDF, 251 KB

german, 1983

3

Unusual Cycloaddition of Tetracyanoethylene to Dispiro[2.0.2.4]deca-7,9-diene

Dr. Dieter Kaufmann, Prof. Dr. Armin de Meijere, Dr. Brian Hingerty, Priv.-Doz. Dr. Wolfram Saenger

Journal:

Angewandte Chemie International Edition

Year:

1975

Language:

english

File:

PDF, 229 KB

english, 1975

4

Flip-Flop Hydrogen Bonds in β-Cyclodextrin—A Generally Valid Principle in Polysaccharides?

Prof. Dr. Wolfram Saenger, Christian Betzel, Dr. Brian Hingerty, Dr. George M. Brown

Journal:

Angewandte Chemie International Edition

Year:

1983

Language:

english

File:

PDF, 255 KB

english, 1983

5

Classical potential energy calculations for ApA, CpC, GpG, and UpU. The influence of the bases on RNA subunit conformations

Suse B. Broyde, Roger M. Wartell, Steven D. Stellman, Brian Hingerty, Robert Langridge

Journal:

Year:

1975

Language:

english

File:

PDF, 798 KB

english, 1975

6

The poly(rU) coil: A minimum-energy model that matches experimental observations

Brian E. Hingerty, Suse B. Broyde, Wilma K. Olson

Journal:

Year:

1982

Language:

english

File:

PDF, 1.19 MB

english, 1982

7

Carcinogen–base stacking and base–base stacking in dCpdG modified by (+) and (−) anti-BPDE

Brian E. Hingerty, Suse Broyde

Journal:

Year:

1985

Language:

english

File:

PDF, 916 KB

english, 1985

8

Prediction of DNA structure from sequence: A build-up technique

Brian E. Hingerty, Samuel Figueroa, Thomas L. Hayden, Suse Broyde

Journal:

Year:

1989

Language:

english

File:

PDF, 1.28 MB

english, 1989

9

The molecular mechanics program DUPLEX: Computing structures of carcinogen modified DNA by surveying the potential energy surface

Brian E. Hingerty, Suse Broyde

Journal:

Molecular Engineering

Year:

1995

Language:

english

File:

PDF, 530 KB

english, 1995

10

Accomodation of S-cis-tamoxifen-N2-guanine adduct within a bent and widened DNA minor groove

Sakurako Shimotakahara, Andrey Gorin, Alexander Kolbanovskiy, Abdelali Kettani, Brian E Hingerty, Shantu Amin, Suse Broyde, Nicholas Geacintov, Dinshaw J Patel

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 745 KB

english, 2000

11

Molecular topology of polycyclic aromatic carcinogens determines DNA adduct conformation: a link to tumorigenic activity

Chin H Lin, Xuanwei Huang, Alexander Kolbanovskii, Brian E Hingerty, Shantu Amin, Suse Broyde, Nicholas E Geacintov, Dinshaw J Patel

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 1.00 MB

english, 2001

12

Methylation of Cytosine at C5 in a CpG Sequence Context Causes a Conformational Switch of a Benzo[a]pyrene diol epoxide-N2-guanine Adduct in DNA from a Minor Groove Alignment to Intercalation with Base Displacement

Na Zhang, Chin Lin, Xuanwei Huang, Aleksandr Kolbanovskiy, Brian E. Hingerty, Shantu Amin, Suse Broyde, Nicholas E. Geacintov, Dinshaw J. Patel

Journal:

Journal of Molecular Biology

Year:

2005

Language:

english

File:

PDF, 564 KB

english, 2005

13

DNA Adducts from a Tumorigenic Metabolite of Benzo[a]pyrene Block Human RNA Polymerase II Elongation in a Sequence- and Stereochemistry-dependent Manner

Rebecca A Perlow, Alexander Kolbanovskii, Brian E Hingerty, Nicholas E Geacintov, Suse Broyde, David A Scicchitano

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 967 KB

english, 2002

14

Book reviews

James G. Devlin, Robert Carroll, Geoffrey J. Bourke, N. Jaswon, J. C. Cherry, Douglas E. Mellon, Alan D. H. Browne, John P. Malone, Brian Pringle, D. Hingerty, Michael Waldron, P. B. B. Gatenby

Journal:

Irish Journal of Medical Science

Year:

1967

Language:

english

File:

PDF, 556 KB

english, 1967

15

Accurate Representation of B-DNA Double Helical Structure with Implicit Solvent and Counterions

Wang, Lihua, Hingerty, Brian E., Srinivasan, A.R., Olson, Wilma K., Broyde, Suse

Journal:

Biophysical Journal

Year:

2002

Language:

english

File:

PDF, 1.78 MB

english, 2002

16

Stabilization of the tertiary structure of yeast phenylalanine tRNA by [Co(NH3)6]3+: X-ray evidence for hydrogen bonding to pairs of guanine bases in the major groove

Brian E. Hingerty, Raymond S. Brown, Aaron Klug

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression

Year:

1982

Language:

english

File:

PDF, 349 KB

english, 1982

17

Molecular Dynamics Simulation of a Tumorigenic Benzo[a]pyrene Metabolite Bound to DNA at a Single Strand-Double Strand Junction

SURESH B. SINGH, BIN LI, BRIAN E. HINGERTY, ROBERT SHAPIRO, SUSE BROYDE

Journal:

Annals of the New York Academy of Sciences

Year:

1994

Language:

english

File:

PDF, 1020 KB

english, 1994

18

Topography of cyclodextrin inclusion complexes, part 20. Circular and flip-flop hydrogen bonding in .beta.-cyclodextrin undecahydrate: a neutron diffraction study

Betzel, Christian, Saenger, Wolfram, Hingerty, Brian E., Brown, George M.

Journal:

Journal of the American Chemical Society

Year:

1984

Language:

english

File:

PDF, 1.46 MB

english, 1984

19

Effect of Ring Size on Conformations of Aromatic Amine−DNA Adducts: The Aniline−C8 Guanine Adduct Resides in the B-DNA Major Groove

Shapiro, Robert, Ellis, Stephen, Hingerty, Brian E., Broyde, Suse

Journal:

Chemical Research in Toxicology

Year:

1998

Language:

english

File:

PDF, 215 KB

english, 1998

20

Structural Alignments of (+)- and (-)-trans-anti-Benzo[a]pyrene-dG Adducts Positioned at a DNA Replication Fork Junction

Cosman, Monique, Hingerty, Brian E., Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1995

Language:

english

File:

PDF, 2.40 MB

english, 1995

21

Solution Conformation of the (+)-cis-anti-[BP]dG Adduct Opposite a Deletion Site in a DNA Duplex: Intercalation of the Covalently Attached Benzo[a]pyrene into the Helix with Base Displacement of the Modified Deoxyguanosine into the Minor Groove

Cosman, Monique, Fiala, Radovan, Hingerty, Brian E., Amin, Shantu, Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1994

Language:

english

File:

PDF, 1.24 MB

english, 1994

22

Solution Structure of the Aminofluorene-Stacked Conformer of the syn [AF]-C 8 -dG Adduct Positioned at a Template-Primer Junction †,‡

Mao, Bing, Gu, Zhengtian, Gorin, Andrey, Hingerty, Brian E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1997

Language:

english

File:

PDF, 663 KB

english, 1997

23

Solution Conformation of the (−)- cis - anti -Benzo[ a ]pyrenyl-dG Adduct Opposite dC in a DNA Duplex: Intercalation of the Covalently Attached BP Ring into the Helix with Base Displacement of the Modified Deoxyguanosine into the Major Groove †

Cosman, Monique, Hingerty, Brian E., Luneva, Natalia, Amin, Shantu, Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1996

Language:

english

File:

PDF, 987 KB

english, 1996

24

Mutation and repair induced by the carcinogen 2-(Hydroxyamino)-1-methyl-6-phenylimidazo[4,5-b]pyridine (N-OH-PhIP) in the dihydrofolate reductase gene of Chinese hamster ovary cells and conformational modeling of the dG-C8-PhIP adduct in DNA

Carothers, Adelaide M., Yuan, Wei, Hingerty, Brian E., Broyde, Suse, Grunberger, Dezider, Snyderwine, Elizabeth G.

Journal:

Chemical Research in Toxicology

Year:

1994

Language:

english

File:

PDF, 2.35 MB

english, 1994

25

Major and Minor Groove Conformations of DNA Trimers Modified on Guanine or Adenine by 4-Aminobiphenyl: Adenine Adducts Favor the Minor Groove

Shapiro, Robert, Ellis, Stephen, Hingerty, Brian E., Broyde, Suse

Journal:

Chemical Research in Toxicology

Year:

1995

Language:

english

File:

PDF, 1.28 MB

english, 1995

26

NMR Solution Structures of Stereoisomeric Covalent Polycyclic Aromatic Carcinogen−DNA Adducts: Principles, Patterns, and Diversity

Geacintov, Nicholas E., Cosman, Monique, Hingerty, Brian E., Amin, Shantu, Broyde, Suse, Patel, Dinshaw J.

Journal:

Chemical Research in Toxicology

Year:

1997

Language:

english

File:

PDF, 1.02 MB

english, 1997

27

Conformation of Amine-Modified DNA: 2-Aminofluorene- and 2-(Acetylamino)fluorene-Modified Deoxydinucleoside Monophosphates with All Possible Nearest Neighbors. A Comparison of Search and Optimization Methods

Shapiro, Robert, Sidawi, Dany, Miao, Yong-Su, Hingerty, Brian E., Schmidt, Kevin E., Moskowitz, Jules, Broyde, Suse

Journal:

Chemical Research in Toxicology

Year:

1994

Language:

english

File:

PDF, 2.61 MB

english, 1994

28

Solution conformation of the (+)-trans-anti-[BPh]dA adduct opposite dT in a DNA duplex: Intercalation of the covalently attached benzo[c]phenanthrene to the 5'-side of the adduct site without disruption of the modified base pair

Cosman, Monique, Fiala, Radovan, Hingerty, Brian E., Laryea, Alfred, Lee, Hongmee, Harvey, Ronald G., Amin, Shantu, Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw

Journal:

Year:

1993

Language:

english

File:

PDF, 1.30 MB

english, 1993

29

Solution Structure of the (+)- cis - anti -Benzo[ a ]pyrene-dA ([BP]dA) Adduct Opposite dT in a DNA Duplex †

Mao, Bing, Gu, Zhentian, Gorin, Andrey, Chen, Junxin, Hingerty, Brian E., Amin, Shantu, Broyde, Suse, Geacintov, Nicholas E., Patel, Dinshaw J.

Journal:

Year:

1999

Language:

english

File:

PDF, 201 KB

english, 1999

30

Solution Structure of the Aminofluorene [AF]-Intercalated Conformer of the syn -[AF]-C 8 -dG Adduct Opposite dC in a DNA Duplex †

Mao, Bing, Hingerty, Brian E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1998

Language:

english

File:

PDF, 367 KB

english, 1998

31

Conformation of d(CpG) modified by the carcinogen 4-aminobiphenyl: a combined experimental and theoretical analysis

Shapiro, Robert, Underwood, Graham R., Zawadzka, Halina, Broyde, Suse, Hingerty, Brian E.

Journal:

Year:

1986

Language:

english

File:

PDF, 978 KB

english, 1986

32

Structural characterization of an N-acetyl-2-aminofluorene (AAF) modified DNA oligomer by NMR, energy minimization, and molecular dynamics

O'Handley, Suzanne F., Sanford, David G., Xu, Rong, Lester, Cathy C., Hingerty, Brian E., Broyde, Suse, Krugh, Thomas R.

Journal:

Year:

1993

Language:

english

File:

PDF, 4.52 MB

english, 1993

33

Solution Conformation of the (-)-trans-anti-Benzo[c]phenanthrene-dA ([BPh]dA) Adduct opposite dT in a DNA Duplex: Intercalation of the Covalently Attached Benzo[c]phenanthrenyl Ring to the 3'-Side of the Adduct Site and Comparison with the (+)-trans-anti-[BPh]dA opposite dT Stereoisomer

Cosman, Monique, Laryea, Alfred, Fiala, Radovan, Hingerty, Brian E., Amin, Shantu, Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1995

Language:

english

File:

PDF, 1.58 MB

english, 1995

34

NMR and computational characterization of the N-(deoxyguanosin-8-yl)aminofluorene adduct [(AF)G] opposite adenosine in DNA: (AF)G[syn].cntdot.A[anti] pair formation and its pH dependence

Norman, David, Abuaf, Perlet, Hingerty, Brian E., Live, David, Grunberger, Dezider, Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1989

Language:

english

File:

PDF, 1.75 MB

english, 1989

35

Solution Structure of the N -(Deoxyguanosin-8-yl)-1-aminopyrene ([AP]dG) Adduct Opposite dA in a DNA Duplex †

Gu, Zhengtian, Gorin, Andrey, Krishnasamy, Ramji, Hingerty, Brian E., Basu, Ashis K., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1999

Language:

english

File:

PDF, 220 KB

english, 1999

36

Interactions between DNA Polymerase β and the Major Covalent Adduct of the Carcinogen (+)- anti -Benzo[ a ]pyrene Diol Epoxide with DNA at a Primer−Template Junction †

Singh, Suresh B., Beard, William A., Hingerty, Brian E., Wilson, Samuel H., Broyde, Suse

Journal:

Year:

1998

Language:

english

File:

PDF, 129 KB

english, 1998

37

Influence of benzo[a]pyrenediol epoxide chirality on solution conformations of DNA covalent adducts: the (-)-trans-anti-[BP]G.cntdot.C adduct structure and comparison with the (+)-trans-anti[BP]G.cntdot.C enantiomer

De Los Santos, Carlos, Cosman, Monique, Hingerty, Brian E., Ibanez, Victor, Margulis, Leonid A., Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1992

Language:

english

File:

PDF, 931 KB

english, 1992

38

Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: Intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine

Cosman, Monique, de los Santos, Carlos, Fiala, Radovan, Hingerty, Brian E., Ibanez, Victor, Luna, Ernestina, Harvey, Ronald, Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1993

Language:

english

File:

PDF, 1.29 MB

english, 1993

39

Solution Conformation of [AF]dG Opposite a -1 Deletion Site in a DNA Duplex: Intercalation of the Covalently Attached Aminofluorene Ring into the Helix with Base Displacement of the C8-Modified Syn Guanine into the Major Groove

Mao, Bing, Cosman, Monique, Hingerty, Brian E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1995

Language:

english

File:

PDF, 1.59 MB

english, 1995

40

Nucleic Acids: Structures, Properties, and Functions By Victor A. Bloomfield (University of Minnesota), Donald M. Crothers (Yale University), and Ignacio Tinoco, Jr. (University of California, Berkeley). University Science Books: Sausalito, CA. 2000. xii+ 794 pp. $85.00. ISBN 0-935702-49-0.

Hingerty, Brian

Journal:

Journal of the American Chemical Society

Year:

2000

Language:

english

File:

PDF, 20 KB

english, 2000

41

Solution Conformation of the (−)- trans - anti -[BP]dG Adduct Opposite a Deletion Site in a DNA Duplex: Intercalation of the Covalently Attached Benzo[ a ]pyrene into the Helix with Base Displacement of the Modified Deoxyguanosine into the Minor Groove †

Feng, Binbin, Gorin, Andrey, Kolbanovskiy, Alexander, Hingerty, Brian E., Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1997

Language:

english

File:

PDF, 266 KB

english, 1997

42

Solution Structure of an O 6 -[4-oxo-4-(3-Pyridyl)butyl]guanine Adduct in an 11mer DNA Duplex: Evidence for Formation of a Base Triplex †

Peterson, Lisa A., Vu, Choua, Hingerty, Brian E., Broyde, Suse, Cosman, Monique

Journal:

Year:

2003

Language:

english

File:

PDF, 414 KB

english, 2003

43

Solution Conformation of the N-(Deoxyguanosin-8-yl)aminofluorene Adduct opposite Deoxyinosine and Deoxyguanosine in DNA by NMR and Computational Characterization

Abuaf, Perlette, Hingerty, Brian E., Broyde, Suse, Grunberger, Dezider

Journal:

Chemical Research in Toxicology

Year:

1995

Language:

english

File:

PDF, 1.15 MB

english, 1995

44

Solution Conformation of the N -(Deoxyguanosin-8-yl)-1-aminopyrene ([AP]dG) Adduct Opposite dC in a DNA Duplex †

Mao, Bing, Vyas, Rajeev R., Hingerty, Brian E., Broyde, Suse, Basu, Ashis K., Patel, Dinshaw J.

Journal:

Year:

1996

Language:

english

File:

PDF, 449 KB

english, 1996

45

Solution Conformation of the (+)-trans-anti-[BP]dG Adduct Opposite a Deletion Site in a DNA Duplex: Intercalation of the Covalently Attached Benzo[a]pyrene into the Helix with Base Displacement of the Modified Deoxyguanosine into the Major Groove

Cosman, Monique, Fiala, Radovan, Hingerty, Brian E., Amin, Shantu, Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1994

Language:

english

File:

PDF, 1.32 MB

english, 1994

46

Topography of cyclodextrin inclusion complexes. 28. Neutron diffraction study of the hydrogen bonding in partially deuterated .gamma.-cyclodextrin.cntdot.15.cntdot.7D2O at T = 110 K

Ding, Jianping, Steiner, Thomas, Zabel, Volker, Hingerty, Brian E., Mason, Sax A., Saenger, Wolfram

Journal:

Journal of the American Chemical Society

Year:

1991

Language:

english

File:

PDF, 2.80 MB

english, 1991

47

NMR and computational characterization of mitomycin cross-linked to adjacent deoxyguanosines in the minor groove of the d(T-A-C-G-T-A).cntdot.d(T-A-C-G-T-A) duplex

Norman, David, Live, David, Sastry, Mallika, Lipman, Roselyn, Hingerty, Brian E., Tomasz, Maria, Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1990

Language:

english

File:

PDF, 1.67 MB

english, 1990

48

Solution Conformation of the (-)-trans-anti-5-Methylchrysene-dG Adduct opposite dC in a DNA Duplex: DNA Bending Associated with Wedging of the Methyl Group of 5-Methylchrysene to the 3'-Side of the Modification Site

Cosman, Monique, Xu, Rong, Hingerty, Brian E., Amin, Shantu, Harvey, Ronald G., Geacintov, Nicholas E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1995

Language:

english

File:

PDF, 1.63 MB

english, 1995

49

Solution Structure of the Aminofluorene-Intercalated Conformer of the syn [AF]-C 8 -dG Adduct Opposite a −2 Deletion Site in the Nar I Hot Spot Sequence Context †,‡

Mao, Bing, Gorin, Andrey, Gu, Zhengtian, Hingerty, Brian E., Broyde, Suse, Patel, Dinshaw J.

Journal:

Year:

1997

Language:

english

File:

PDF, 279 KB

english, 1997

50

A Slipped Replication Intermediate Model Is Stabilized by the Syn Orientation of N -2-Aminofluorene- and N -2-(Acetyl)aminofluorene-Modified Guanine at a Mutational Hotspot

Roy, Debjani, Hingerty, Brian E., Shapiro, Robert, Broyde, Suse

Journal:

Chemical Research in Toxicology

Year:

1998

Language:

english

File:

PDF, 244 KB

english, 1998